dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00630
Location and strand information: 189750 - 192803 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00631
Location and strand information: 193041 - 194102 (-)
Family: null
Protein type: null
Protein description: Beta-barrel assembly-enhancing protease

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00632
Location and strand information: 194102 - 195082 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00633
Location and strand information: 195252 - 197948 (+)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9825
Protein molecular weight: 101824.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00634
Location and strand information: 198041 - 202303 (+)
Family: GH137|GH2|CBM57
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.1414
Protein molecular weight: 161289.72
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00635
Location and strand information: 202334 - 205585 (+)
Family: CBM67|GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.0303
Protein molecular weight: 121425.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00636
Location and strand information: 205693 - 206244 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00637
Location and strand information: 206326 - 206460 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00638
Location and strand information: 206628 - 209501 (+)
Family: GH2
Protein type: CAZyme
Protein description: Evolved beta-galactosidase subunit alpha
Protein isoelectric point: 7.858
Protein molecular weight: 107614.68
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00639
Location and strand information: 209700 - 212972 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.9643
Protein molecular weight: 121530.45
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00640
Location and strand information: 212996 - 214432 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00641
Location and strand information: 214448 - 216700 (+)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.7142
Protein molecular weight: 86317.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00642
Location and strand information: 216738 - 219362 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 7.6264
Protein molecular weight: 98095.66
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00643
Location and strand information: 219446 - 223816 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003064_2|CGC2
Gene ID: MGYG000003064_00644
Location and strand information: 223910 - 225562 (+)
Family: PL1|PL1_2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.7488
Protein molecular weight: 60281.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000003064_00633	GH138_e0\|3.2.1.-
MGYG000003064_00634	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000003064_00635	GH2_e4\|CBM67_e8\|3.2.1.23	beta-galactan
MGYG000003064_00638	GH2_e77\|3.2.1.-	pectin
MGYG000003064_00639	GH106_e13\|3.2.1.40	pectin
MGYG000003064_00641	GH139_e0\|3.2.1.-	pectin
MGYG000003064_00642	GH2_e53
MGYG000003064_00644	PL1_e27

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003064_00630	TonB-dependent receptor SusC	TC	189750	192803	-	1.B.14.6.1
MGYG000003064_00631	Beta-barrel assembly-enhancing protease	null	193041	194102	-	Peptidase_M48
MGYG000003064_00632	hypothetical protein	null	194102	195082	-	DUF898\| DUF898
MGYG000003064_00633	hypothetical protein	CAZyme	195252	197948	+	GH138
MGYG000003064_00634	Beta-galactosidase	CAZyme	198041	202303	+	GH137\| GH2\| CBM57
MGYG000003064_00635	Beta-galactosidase	CAZyme	202334	205585	+	CBM67\| GH2
MGYG000003064_00636	hypothetical protein	null	205693	206244	-	No domain
MGYG000003064_00637	hypothetical protein	null	206326	206460	-	No domain
MGYG000003064_00638	Evolved beta-galactosidase subunit alpha	CAZyme	206628	209501	+	GH2
MGYG000003064_00639	hypothetical protein	CAZyme	209700	212972	+	GH106
MGYG000003064_00640	hypothetical protein	null	212996	214432	+	SASA
MGYG000003064_00641	hypothetical protein	CAZyme	214448	216700	+	GH139
MGYG000003064_00642	Beta-galactosidase	CAZyme	216738	219362	+	GH2
MGYG000003064_00643	Sensor histidine kinase RcsC	TF	219446	223816	+	HTH_AraC+HTH_AraC
MGYG000003064_00644	hypothetical protein	CAZyme	223910	225562	+	PL1\| PL1_2
Protein ID	Protein Name	Type	Start	End	Strand	Signature